From Microbes to Medicine

The Legacy and Future Horizons of Czech Microbiology

Eighteenth Congress of the Czechoslovak Society for Microbiology (2025)

Where Heritage Meets Innovation

The Eighteenth Congress of the Czechoslovak Society for Microbiology (2025) represents a pivotal nexus of scientific tradition and cutting-edge discovery. Against a backdrop of global health crises—from antimicrobial resistance (AMR) claiming 1.27 million lives annually to microbiome-based therapies revolutionizing medicine—this gathering transcends academic discourse. It embodies Czechoslovakia's storied legacy in microbiology while spearheading solutions for humanity's most pressing challenges 4 .


Decoding the Microbial Universe

Antimicrobial Resistance (AMR): The Silent Pandemic

CRISPR-based "resistance breakers"

Czech researchers unveiled CRISPR-based technology that disarm AMR genes in Klebsiella pneumoniae. This approach restored susceptibility to last-line antibiotics like colistin in 92% of clinical isolates 4 .

Fecal microbiota transplants

Dr. Jan Dobeš (Prague) highlighted fecal microbiota transplants as a weapon against Clostridioides difficile, achieving 94% efficacy in recurrent infections—outperforming vancomycin 4 .

Microbiome-Host Symbiosis: Beyond the Gut

Groundbreaking work on microbial metabolites revealed how butyrate:

  • Activates regulatory T-cells, dampening intestinal inflammation
  • Crosses the blood-brain barrier, modulating stress responses via the gut-brain axis 4 .
Lactobacillus for Malnutrition

Dr. Martin Schwarzer's team demonstrated that Lactobacillus strains correct microbiota disruptions in malnourished infants, accelerating weight gain by 40% compared to standard therapy 4 .

Environmental Microbiology: Climate's Unseen Warriors

Cyanobacteria Biofilms

Session highlights included cyanobacteria biofilms that sequester COâ‚‚ at rates 30x higher than forests 7 .

Plastic-Degrading Bacteria

Plastic-degrading Ideonella sakaiensis engineered to process PET waste 5x faster 7 .

AMR Breakthroughs Presented at the Congress

Presenter Innovation Efficacy Stage
Dr. Bożena Cukrowska Anti-biofilm nanoparticles 99% MRSA kill rate Phase II trials
Dr. Tor Savidge Phage-antibiotic conjugates 85% eradication Preclinical
Dr. Elena Verdú Celiac-targeted probiotics Symptom reduction Clinical validation

Landmark Experiment: Antibiotics Unearthed

The Quest for Novel Antimicrobials

Background: Inspired by soil microbiologists like Selman Waksman (discoverer of streptomycin), this citizen-science initiative mobilized 17 universities to explore untouched ecosystems for antibiotic-producing microbes .

Methodology: Step-by-Step Discovery

Soil Collection

2,000+ samples from Czech old-growth forests, Alps glacier beds, and urban soils.

Enrichment Culture

Samples plated on high-nutrient agar with pathogen "bait" (Staphylococcus aureus, E. coli O157).

Zone of Inhibition Screening

143 isolates showed activity against ESKAPE pathogens.

Genomic Sequencing

CRISPR-Cas9 knockout libraries identified biosynthetic gene clusters.

Compound Purification

HPLC and NMR characterized novel lipopeptides.

Results & Impact

Amycolatopsis pragensis

Produced pragensin, effective against pan-resistant Acinetobacter.

  • MIC90 against Gram-negatives: 0.5 µg/mL (vs. 32 µg/mL for meropenem)
  • Mammalian cell toxicity: Undetectable at therapeutic doses

Patent filed with EU Antibiotic Incentive Program; human trials begin 2026.

Antibiotics Unearthed - Discovery Metrics

Source Samples Analyzed Active Isolates Novel Compounds
Forest soils 1,210 89 7
Glacier meltwaters 392 31 3
Urban park soils 418 23 1

The Scientist's Toolkit

Essential Reagents Revolutionizing Research

Reagent/Material Function Key Application
Chromogenic CRISPR-Cas12a Visual AMR gene detection Point-of-care diagnostics
Synthetic human gut bioreactors Mimic intestinal conditions Probiotic screening
Nano-encapsulated phages Enhanced biofilm penetration Chronic infection treatment
Stable isotope probing (SIP) kits Track nutrient flows in microbiomes Environmental remediation studies
Metagenomic long-read sequencers Unbiased microbiome analysis Pathogen discovery

Historical Roots: Foundations of Excellence

The Czechoslovak Society traces its ethos to pioneers like:

Ferdinand Cohn (1872)

First bacterial classification system, coining the genus Bacillus 6 .

Gerhard Hansen (1873)

Identified Mycobacterium leprae—the first proof of bacterial human disease 6 .

Modern Legacy

Society journals like International Journal of Systematic Microbiology (adopted 1997) set global standards for microbial taxonomy .


Microbes as Humanity's Collaborators

As the 2025 Congress concludes, microbiology's horizon expands beyond pathogens. Czech scientists now harness microbes for:

Climate solutions

Methane-consuming archaea for emission reduction

Personalized medicine

Fecal virome transplants to reprogram cancer immunity

Food security

Nitrogen-fixing microbial consortia replacing fertilizers 7 .

"We are not just studying microbes—we are partnering with evolution itself."

Dr. Helena Tlaskalová-Hogenová (honorary chair)

Young scientists from the FMI 2025 Poster Award cohort will lead the Society's XIX Congress in 2027, focusing on "Microbial Symbiosis for Planetary Health." 4 .

References